Transcript: ENSDART00000171700.2 meis2a-204

Description

Meis homeobox 2a [Source:NCBI gene (formerly Entrezgene);Acc:170454]

Location

Chromosome 17: 52,823,676-52,840,393 forward strand.

About this transcript

This transcript has 5 exons, is associated with 328 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098240.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193368.1	meis2a-206	2783	397aa	ENSDARP00000155813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000161414.2	meis2a-203	3169	390aa	ENSDARP00000137649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKR5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000158273.2	meis2a-201	1299	251aa	ENSDARP00000137674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000186979.1	meis2a-205	1221	396aa	ENSDARP00000153019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160507.2	meis2a-202	581	151aa	ENSDARP00000136593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171700.2	meis2a-204	639	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 639 bps,

Version

ENSDART00000171700.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000171700.2 meis2a-204

Summary

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Transcript: ENSDART00000171700.2 meis2a-204

Summary

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