Transcript: ENSDART00000171679.2 si:dkey-74k8.4-202

Description

si:dkey-74k8.4 [Source:ZFIN;Acc:ZDB-GENE-141219-40]

Location

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 427 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171679.2	si:dkey-74k8.4-202	1052	252aa	ENSDARP00000138723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000165882.2	si:dkey-74k8.4-201	906	235aa	ENSDARP00000136827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000188539.1	si:dkey-74k8.4-205	642	213aa	ENSDARP00000149681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180889.1	si:dkey-74k8.4-204	558	185aa	ENSDARP00000147980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000172406.2	si:dkey-74k8.4-203	474	54aa	ENSDARP00000130448.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,052 bps, Translation length: 252 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000171679.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.