Transcript: ENSDART00000171656.2 sh2d3cb-203

Description

SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]

Gene Synonyms

sh2d3c, zgc:56490

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 929 variant alleles and maps to 180 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171656.2	sh2d3cb-203	2537	635aa	ENSDARP00000140658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IVP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171024.2	sh2d3cb-202	694	231aa	ENSDARP00000133196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ77	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000160429.2	sh2d3cb-201	659	140aa	ENSDARP00000136849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IM92	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,537 bps, Translation length: 635 residues

Version

ENSDART00000171656.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.