Transcript: ENSDART00000171641.2 pcxa-203

Description

pyruvate carboxylase a [Source:ZFIN;Acc:ZDB-GENE-090908-3]

Gene Synonyms

PYCa, information overload, pcl, zgc:123047

Location

About this transcript

This transcript has 5 exons, is associated with 851 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168379.2	pcxa-201	3887	1181aa	ENSDARP00000132084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169025.3	pcxa-202	8416	1181aa	ENSDARP00000134228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFJ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171641.2	pcxa-203	1384	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,384 bps,

Version

ENSDART00000171641.2

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.