Transcript: ENSDART00000171602.2 chmp1a-203

Description

charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]

Gene Synonyms

pcoln3, wu:fb50a12, zgc:65914, zgc:85863

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 164 variant alleles and maps to 226 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000164390.2	chmp1a-201	597	198aa	ENSDARP00000141533.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000171602.2	chmp1a-203	1172	134aa	ENSDARP00000130498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169192.2	chmp1a-202	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,172 bps, Translation length: 134 residues

Version

ENSDART00000171602.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.