Transcript: ENSDART00000171490.2 pcdh8.2-202

Description

protocadherin 8, tandem duplication 2 [Source:ZFIN;Acc:ZDB-GENE-120215-215]

Gene Synonyms

si:ch211-199f5.1

Location

About this transcript

This transcript has 3 exons, is annotated with 63 domains and features, is associated with 261 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171490.2	pcdh8.2-202	2913	970aa	ENSDARP00000140533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165827.2	pcdh8.2-201	314	104aa	ENSDARP00000132146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,913 bps, Translation length: 970 residues

Version

ENSDART00000171490.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.