Transcript: ENSDART00000171439.2 si:ch211-227n13.3-202

Description

si:ch211-227n13.3 [Source:ZFIN;Acc:ZDB-GENE-141222-2]

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 334 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172633.2	si:ch211-227n13.3-203	1737	447aa	ENSDARP00000137395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QM28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163295.2	si:ch211-227n13.3-201	870	204aa	ENSDARP00000139952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171439.2	si:ch211-227n13.3-202	585	158aa	ENSDARP00000134843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 585 bps, Translation length: 158 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171439.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.