Transcript: ENSDART00000171350.2 cdh29-202

Description

cadherin 29 [Source:ZFIN;Acc:ZDB-GENE-141212-240]

Location

About this transcript

This transcript has 9 exons, is annotated with 32 domains and features, is associated with 122 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171350.2	cdh29-202	1449	454aa	ENSDARP00000139609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000191559.1	cdh29-205	6829	389aa	ENSDARP00000149416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000185104.1	cdh29-203	6749	389aa	ENSDARP00000147726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000160096.2	cdh29-201	2133	450aa	ENSDARP00000135690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189816.1	cdh29-204	1564	312aa	ENSDARP00000151814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,449 bps, Translation length: 454 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171350.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.