Transcript: ENSDART00000171292.2 si:ch211-145b13.6-203

Description

si:ch211-145b13.6 [Source:ZFIN;Acc:ZDB-GENE-090313-36]

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 55 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170878.2	si:ch211-145b13.6-202	1088	291aa	ENSDARP00000141451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1B1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000102346.5	si:ch211-145b13.6-201	876	291aa	ENSDARP00000093122.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1B1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171292.2	si:ch211-145b13.6-203	834	224aa	ENSDARP00000139169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 834 bps, Translation length: 224 residues

Version

ENSDART00000171292.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.