Transcript: ENSDART00000171278.2 ddx47-202

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]

Gene Synonyms

si:ch1073-304j18.2, zgc:112350

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 81 variant alleles and maps to 2 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163535.2	ddx47-201	906	270aa	ENSDARP00000132528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IH57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000171278.2	ddx47-202	477	159aa	ENSDARP00000134322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKR1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 477 bps, Translation length: 159 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000171278.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.