Transcript: ENSDART00000171244.2 ssh2b-202

Description

slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]

Gene Synonyms

zgc:175142

Location

About this transcript

This transcript has 15 exons, is annotated with 34 domains and features, is associated with 1558 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171244.2	ssh2b-202	3109	1016aa	ENSDARP00000131244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IAC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000190675.1	ssh2b-203	3540	1179aa	ENSDARP00000155575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RXU6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169666.2	ssh2b-201	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,109 bps, Translation length: 1,016 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171244.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.