Transcript: ENSDART00000171190.2 SLC16A6-201

Description

solute carrier family 16 member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]

Location

About this transcript

This transcript has 7 exons and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000170923.2	SLC16A6-204	1670	495aa	ENSDARP00000134437.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171190.2	SLC16A6-201	3169	495aa	ENSDARP00000138224.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-
ENSDART00000167950.2	SLC16A6-202	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000165811.2	SLC16A6-203	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,169 bps, Translation length: 495 residues

Version

ENSDART00000171190.2

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.