Transcript: ENSDART00000171162.1 ildr1a-206

Description

immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]

Location

Chromosome 1: 46,037-48,933 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 156 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103929.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000168428.1	ildr1a-205	2623	464aa	ENSDARP00000130985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171162.1	ildr1a-206	917	306aa	ENSDARP00000136865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000161565.1	ildr1a-202	618	82aa	ENSDARP00000131809.1	Nonsense mediated decay	-
ENSDART00000166228.1	ildr1a-204	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000164034.1	ildr1a-203	402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000161352.1	ildr1a-201	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 917 bps, Translation length: 306 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000171162.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000171162.1 ildr1a-206

Summary

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Transcript: ENSDART00000171162.1 ildr1a-206

Summary

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