Transcript: ENSDART00000171080.2 MSH6-204

Description

mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]

Location

About this transcript

This transcript has 10 exons, is annotated with 40 domains and features, is associated with 677 variant alleles and maps to 249 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171080.2	MSH6-204	4396	1369aa	ENSDARP00000131172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162531.2	MSH6-201	801	234aa	ENSDARP00000130154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161959.2	MSH6-202	444	129aa	ENSDARP00000140704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165311.2	MSH6-203	426	109aa	ENSDARP00000133896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,396 bps, Translation length: 1,369 residues

Version

ENSDART00000171080.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.