Transcript: ENSDART00000171051.2 si:ch211-76m11.5-203

Description

si:ch211-76m11.5 [Source:ZFIN;Acc:ZDB-GENE-240105-2]

Location

About this transcript

This transcript has 9 exons, is annotated with 39 domains and features, is associated with 122 variant alleles and maps to 501 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171051.2	si:ch211-76m11.5-203	3291	1083aa	ENSDARP00000133927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166884.2	si:ch211-76m11.5-202	2898	965aa	ENSDARP00000136636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157906.2	si:ch211-76m11.5-201	1242	400aa	ENSDARP00000135624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000171918.2	si:ch211-76m11.5-204	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,291 bps, Translation length: 1,083 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000171051.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.