Transcript: ENSDART00000170951.2 PXDN-203

Description

peroxidasin [Source:ZFIN;Acc:ZDB-GENE-140415-2]

Location

Chromosome 17: 51,520,073-51,612,088 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 66 domains and features, is associated with 1267 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098733.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000170951.2	PXDN-203	4383	1460aa	ENSDARP00000131814.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193528.1	PXDN-202	4374	1457aa	ENSDARP00000152063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000180896.1	PXDN-201	4323	1440aa	ENSDARP00000148030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189492.1	PXDN-204	4254	1417aa	ENSDARP00000149875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000189646.1	PXDN-205	960	319aa	ENSDARP00000148616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,383 bps, Translation length: 1,460 residues

Version

ENSDART00000170951.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000170951.2 PXDN-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000170951.2 PXDN-203

Summary

About Us

Get help

Our sister sites

Follow us