Transcript: ENSDART00000170801.2 UBE2M-205

Description

si:ch1073-205c8.4 [Source:ZFIN;Acc:ZDB-GENE-141219-17]

Location

Chromosome 19: 48,018,829-48,021,576 forward strand.

About this transcript

This transcript has 4 exons, is associated with 99 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101521.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172307.2	UBE2M-207	1324	185aa	ENSDARP00000138225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163848.2	UBE2M-204	1109	172aa	ENSDARP00000129958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000158269.2	UBE2M-202	917	86aa	ENSDARP00000140920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000161339.2	UBE2M-203	863	125aa	ENSDARP00000132582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000166978.2	UBE2M-208	770	129aa	ENSDARP00000135845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000159750.2	UBE2M-206	944	112aa	ENSDARP00000130790.1	Nonsense mediated decay	-	-
ENSDART00000170801.2	UBE2M-205	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000163141.2	UBE2M-201	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 786 bps,

Version

ENSDART00000170801.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000170801.2 UBE2M-205

Summary

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Transcript: ENSDART00000170801.2 UBE2M-205

Summary

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