Transcript: ENSDART00000170772.2 THRAP3-203

Description

thyroid hormone receptor associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-030219-79]

Location

Chromosome 16: 35,887,967-35,901,707 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 30 domains and features, is associated with 233 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101989.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184321.1	THRAP3-202	3130	921aa	ENSDARP00000144710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AQV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000170772.2	THRAP3-203	2646	881aa	ENSDARP00000139100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWK3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169677.2	THRAP3-201	2234	711aa	ENSDARP00000134639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,646 bps, Translation length: 881 residues

Version

ENSDART00000170772.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000170772.2 THRAP3-203

Summary

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Transcript: ENSDART00000170772.2 THRAP3-203

Summary

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