Transcript: ENSDART00000170738.2 si:ch211-106j21.5-202

Description

si:ch211-106j21.5 [Source:ZFIN;Acc:ZDB-GENE-081103-52]

Location

About this transcript

This transcript has 8 exons, is annotated with 39 domains and features, is associated with 77 variant alleles and maps to 873 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000170738.2	si:ch211-106j21.5-202	3399	1085aa	ENSDARP00000131672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000187593.1	si:ch211-106j21.5-203	3908	671aa	ENSDARP00000149490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000159687.2	si:ch211-106j21.5-201	2545	729aa	ENSDARP00000130179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,399 bps, Translation length: 1,085 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000170738.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.