Transcript: ENSDART00000170717.2 sv2-202

Description

synaptic vesicle glycoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-000607-80]

Gene Synonyms

id:ibd5037

Location

About this transcript

This transcript has 12 exons, is associated with 140 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128816.3	sv2-201	1795	522aa	ENSDARP00000106289.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170717.2	sv2-202	1594	192aa	ENSDARP00000138772.1	Nonsense mediated decay	A0A0R4IQP6	-

Summary

Statistics

Exons: 12, Coding exons: 6, Transcript length: 1,594 bps, Translation length: 192 residues

Version

ENSDART00000170717.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.