Transcript: ENSDART00000170677.2 ttc16-202

Description

tetratricopeptide repeat domain 16 [Source:ZFIN;Acc:ZDB-GENE-141219-15]

Location

About this transcript

This transcript has 13 exons, is annotated with 30 domains and features, is associated with 207 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170677.2	ttc16-202	1933	596aa	ENSDARP00000139979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z0Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161004.2	ttc16-201	1336	446aa	ENSDARP00000138922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,933 bps, Translation length: 596 residues

Version

ENSDART00000170677.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.