Transcript: ENSDART00000170663.3 zgc:158464-203

Description

zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]

Gene Synonyms

si:ch73-116f3.3

Location

Chromosome 18: 50,536,202-50,766,660 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 3236 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100342.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168601.3	zgc:158464-202	1286	73aa	ENSDARP00000130774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KEQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170663.3	zgc:158464-203	4094	307aa	ENSDARP00000131933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IB04	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000188252.1	zgc:158464-204	654	217aa	ENSDARP00000146782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q2G2	-
ENSDART00000158687.3	zgc:158464-201	290	97aa	ENSDARP00000139352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITN6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,094 bps, Translation length: 307 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000170663.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000170663.3 zgc:158464-203

Summary

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Transcript: ENSDART00000170663.3 zgc:158464-203

Summary

About Us

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