Transcript: ENSDART00000170599.2 taf6-203

Description

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040912-23]

Gene Synonyms

wu:fb83e08, wu:fj30b02, zgc:92160

Location

Chromosome 5: 53,700,294-53,757,505 forward strand.

About this transcript

This transcript has 9 exons, is associated with 590 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102998.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161751.3	taf6-201	6990	636aa	ENSDARP00000134854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66HZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000184967.1	taf6-204	6933	617aa	ENSDARP00000148212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9X1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163256.2	taf6-202	2463	584aa	ENSDARP00000132888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGC2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000170599.2	taf6-203	922	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 922 bps,

Version

ENSDART00000170599.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000170599.2 taf6-203

Summary

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Transcript: ENSDART00000170599.2 taf6-203

Summary

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