Transcript: ENSDART00000170580.2 col5a3b-202

Description

collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]

Location

About this transcript

This transcript has 52 exons, is annotated with 53 domains and features, is associated with 736 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000158011.2	col5a3b-201	5595	1723aa	ENSDARP00000136818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170580.2	col5a3b-202	3938	1269aa	ENSDARP00000139390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 52, Coding exons: 52, Transcript length: 3,938 bps, Translation length: 1,269 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000170580.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.