Transcript: ENSDART00000170573.2 si:dkey-15h8.17-202

Description

si:dkey-15h8.17 [Source:ZFIN;Acc:ZDB-GENE-141222-9]

Location

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 84 variant alleles and maps to 7 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170573.2	si:dkey-15h8.17-202	3169	516aa	ENSDARP00000132242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P4D1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180917.1	si:dkey-15h8.17-203	2893	423aa	ENSDARP00000152929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160135.2	si:dkey-15h8.17-201	791	213aa	ENSDARP00000132375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 3,169 bps, Translation length: 516 residues

Version

ENSDART00000170573.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]