Transcript: ENSDART00000170556.2 NFRKB-202

Description

nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]

Location

About this transcript

This transcript has 26 exons, is annotated with 27 domains and features, is associated with 325 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170556.2	NFRKB-202	4459	1290aa	ENSDARP00000135127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B866	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163277.2	NFRKB-203	982	281aa	ENSDARP00000129982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163862.2	NFRKB-201	755	165aa	ENSDARP00000130778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 4,459 bps, Translation length: 1,290 residues

Version

ENSDART00000170556.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.