Transcript: ENSDART00000169992.2 pla2r1-202

Description

phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]

Gene Synonyms

si:ch211-153g16.3

Location

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 556 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111091.5	pla2r1-201	4263	1420aa	ENSDARP00000098758.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183674.1	pla2r1-203	2987	817aa	ENSDARP00000155022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QIJ8	-
ENSDART00000169992.2	pla2r1-202	1181	329aa	ENSDARP00000129898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IB03	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,181 bps, Translation length: 329 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000169992.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.