Transcript: ENSDART00000169974.2 SDR42E1-201

Description

short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]

Location

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 285 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169974.2	SDR42E1-201	1718	387aa	ENSDARP00000139728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZE7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185757.1	SDR42E1-202	1607	335aa	ENSDARP00000145743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N891	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,718 bps, Translation length: 387 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8DZE7

Version

ENSDART00000169974.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.