Transcript: ENSDART00000169780.2 UTP6-202

Description

UTP6 small subunit processome component [Source:ZFIN;Acc:ZDB-GENE-040426-769]

Gene Synonyms

zgc:55648

Location

Chromosome 6: 18,524,444-18,531,386 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 13 domains and features, is associated with 290 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098433.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000169780.2	UTP6-202	2014	594aa	ENSDARP00000134857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160693.2	UTP6-203	732	226aa	ENSDARP00000141893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167167.2	UTP6-201	622	181aa	ENSDARP00000134361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163306.2	UTP6-205	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000162148.2	UTP6-204	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,014 bps, Translation length: 594 residues

Version

ENSDART00000169780.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000169780.2 UTP6-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000169780.2 UTP6-202

Summary

About Us

Get help

Our sister sites

Follow us