Transcript: ENSDART00000169752.2 ccdc40-202

Description

coiled-coil domain 40 molecular ruler complex subunit [Source:ZFIN;Acc:ZDB-GENE-060503-723]

Location

About this transcript

This transcript has 20 exons, is annotated with 21 domains and features, is associated with 648 variant alleles and maps to 267 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169752.2	ccdc40-202	3370	941aa	ENSDARP00000139124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56A40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164275.2	ccdc40-201	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,370 bps, Translation length: 941 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q56A40

Version

ENSDART00000169752.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.