Transcript: ENSDART00000169729.2 sgo1-202

Description

shugoshin 1 [Source:ZFIN;Acc:ZDB-GENE-070112-422]

Gene Synonyms

sgol1, zgc:158297

Location

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 569 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169729.2	sgo1-202	2318	616aa	ENSDARP00000136487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167353.2	sgo1-201	382	99aa	ENSDARP00000134292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFW7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,318 bps, Translation length: 616 residues

Version

ENSDART00000169729.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.