Transcript: ENSDART00000169473.2 fbxo11a-202

Description

F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]

Location

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 459 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159688.2	fbxo11a-201	2862	844aa	ENSDARP00000134626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000171765.2	fbxo11a-203	2999	879aa	ENSDARP00000140781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXA1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190140.1	fbxo11a-205	2577	858aa	ENSDARP00000155828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000169473.2	fbxo11a-202	1685	233aa	ENSDARP00000134594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172086.2	fbxo11a-204	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,685 bps, Translation length: 233 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000169473.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.