Transcript: ENSDART00000169116.2 CPNE4-201

Description

copine IVa [Source:ZFIN;Acc:ZDB-GENE-060503-427]

Location

About this transcript

This transcript has 16 exons, is annotated with 20 domains and features, is associated with 40 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169116.2	CPNE4-201	2580	553aa	ENSDARP00000137554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IS92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191624.1	CPNE4-202	1623	540aa	ENSDARP00000144683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187446.1	CPNE4-203	999	155aa	ENSDARP00000146918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,580 bps, Translation length: 553 residues

Version

ENSDART00000169116.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]