Transcript: ENSDART00000169005.1 cep97-204

Description

centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]

Gene Synonyms

lrriq2, zgc:63856

Location

Chromosome 1: 15,062-16,272 forward strand.

About this transcript

This transcript has 3 exons, is associated with 119 variant alleles and maps to 74 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102407.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166393.1	cep97-203	2386	599aa	ENSDARP00000130314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169005.1	cep97-204	736	40aa	ENSDARP00000137316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ISF5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000161842.1	cep97-201	722	240aa	ENSDARP00000141045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX25	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000170877.1	cep97-205	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000171631.1	cep97-206	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000165461.1	cep97-202	347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 736 bps, Translation length: 40 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000169005.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000169005.1 cep97-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000169005.1 cep97-204

Summary

About Us

Get help

Our sister sites

Follow us