Transcript: ENSDART00000168982.2 si:dkey-238g7.1-203

Description

si:dkey-238g7.1 [Source:ZFIN;Acc:ZDB-GENE-120703-11]

Location

About this transcript

This transcript has 9 exons, is annotated with 40 domains and features, is associated with 18 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000168982.2	si:dkey-238g7.1-203	3315	1044aa	ENSDARP00000135552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172398.2	si:dkey-238g7.1-205	3617	671aa	ENSDARP00000141366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000163041.2	si:dkey-238g7.1-201	2879	737aa	ENSDARP00000140821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000166168.2	si:dkey-238g7.1-202	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000172007.2	si:dkey-238g7.1-204	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,315 bps, Translation length: 1,044 residues

Version

ENSDART00000168982.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.