Transcript: ENSDART00000168829.2 kdm8-203

Description

lysine (K)-specific demethylase 8 [Source:NCBI gene (formerly Entrezgene);Acc:436936]

Location

Chromosome 3: 44,081,623-44,094,226 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 355 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102512.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166866.2	kdm8-202	1396	406aa	ENSDARP00000134388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157902.2	kdm8-201	1693	406aa	ENSDARP00000133489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGD4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190036.1	kdm8-205	1645	390aa	ENSDARP00000152775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188028.1	kdm8-204	1252	259aa	ENSDARP00000150809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBH1	-
ENSDART00000168829.2	kdm8-203	1690	258aa	ENSDARP00000141838.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,690 bps, Translation length: 258 residues

Version

ENSDART00000168829.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000168829.2 kdm8-203

Summary

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Transcript: ENSDART00000168829.2 kdm8-203

Summary

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