Transcript: ENSDART00000168811.2 si:zfos-2131b9.2-202

Description

si:zfos-2131b9.2 [Source:ZFIN;Acc:ZDB-GENE-131118-24]

Location

About this transcript

This transcript has 6 exons, is annotated with 37 domains and features, is associated with 213 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000168811.2	si:zfos-2131b9.2-202	2698	876aa	ENSDARP00000136896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000193397.1	si:zfos-2131b9.2-204	2402	344aa	ENSDARP00000146815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000172216.2	si:zfos-2131b9.2-203	2357	626aa	ENSDARP00000140574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000144471.3	si:zfos-2131b9.2-201	2046	678aa	ENSDARP00000117011.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,698 bps, Translation length: 876 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000168811.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]