Transcript: ENSDART00000168776.2 gne-204

Description

glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]

Gene Synonyms

zgc:77657

Location

Chromosome 1: 12,329,543-12,333,372 forward strand.

About this transcript

This transcript has 2 exons, is associated with 41 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099771.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158595.2	gne-201	3669	732aa	ENSDARP00000137331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000164045.2	gne-202	2247	748aa	ENSDARP00000133094.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4II12	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000165733.2	gne-203	801	213aa	ENSDARP00000134158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ93	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000168776.2	gne-204	857	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 857 bps,

Version

ENSDART00000168776.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000168776.2 gne-204

Summary

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Transcript: ENSDART00000168776.2 gne-204

Summary

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