Transcript: ENSDART00000168691.2 srsf11-205

Description

serine and arginine rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]

Gene Synonyms

sfrs11, wu:fb37g02, zgc:55515

Location

Chromosome 11: 45,388,198-45,393,530 forward strand.

About this transcript

This transcript has 4 exons, is associated with 27 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098574.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167826.2	srsf11-204	2179	461aa	ENSDARP00000138275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171274.2	srsf11-207	550	140aa	ENSDARP00000139328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX38	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000168691.2	srsf11-205	615	91aa	ENSDARP00000134255.1	Nonsense mediated decay	A0A0R4IHS9	-
ENSDART00000161732.2	srsf11-202	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000166697.2	srsf11-203	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000169036.2	srsf11-206	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000159764.2	srsf11-201	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 615 bps, Translation length: 91 residues

Version

ENSDART00000168691.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000168691.2 srsf11-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000168691.2 srsf11-205

Summary

About Us

Get help

Our sister sites

Follow us