Transcript: ENSDART00000168627.2 zfyve9a-201

Description

zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]

Gene Synonyms

sara1b, si:ch211-57g18.2, zfyve9

Location

About this transcript

This transcript has 19 exons, is annotated with 27 domains and features, is associated with 532 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168627.2	zfyve9a-201	5138	1216aa	ENSDARP00000131596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182808.1	zfyve9a-202	3787	1216aa	ENSDARP00000156525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 5,138 bps, Translation length: 1,216 residues

Version

ENSDART00000168627.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.