Transcript: ENSDART00000168559.2 ttf2-202

Description

transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]

Gene Synonyms

si:ch1073-303l5.1

Location

About this transcript

This transcript has 19 exons, is annotated with 20 domains and features, is associated with 665 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161089.3	ttf2-201	4070	1145aa	ENSDARP00000133119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168559.2	ttf2-202	3069	993aa	ENSDARP00000137054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IT52	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171697.2	ttf2-203	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,069 bps, Translation length: 993 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000168559.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.