Transcript: ENSDART00000168541.2

Location

Chromosome 10: 20,448,640-20,453,995 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 408 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100139.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164072.2	-	661	125aa	ENSDARP00000141887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168541.2	-	673	134aa	ENSDARP00000131340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDA9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000159338.2	-	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 673 bps, Translation length: 134 residues

Version

ENSDART00000168541.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000168541.2

Summary

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Transcript: ENSDART00000168541.2

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