Transcript: ENSDART00000168505.2 DIXDC1-202

Description

DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]

Location

Chromosome 21: 25,092,300-25,103,628 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 328 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056267.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000189259.1	DIXDC1-204	6161	685aa	ENSDARP00000147884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000167523.2	DIXDC1-203	5059	683aa	ENSDARP00000137191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000078651.5	DIXDC1-201	2198	604aa	ENSDARP00000073112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168505.2	DIXDC1-202	606	60aa	ENSDARP00000132125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 606 bps, Translation length: 60 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000168505.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000168505.2 DIXDC1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000168505.2 DIXDC1-202

Summary

About Us

Get help

Our sister sites

Follow us