Transcript: ENSDART00000168473.2 si:ch73-132f6.5-201

Description

si:ch73-132f6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9581]

Location

About this transcript

This transcript has 20 exons, is annotated with 7 domains and features, is associated with 546 variant alleles and maps to 77 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190194.1	si:ch73-132f6.5-203	3647	679aa	ENSDARP00000157072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168473.2	si:ch73-132f6.5-201	2398	679aa	ENSDARP00000139504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX64	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172059.2	si:ch73-132f6.5-202	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,398 bps, Translation length: 679 residues

Version

ENSDART00000168473.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.