Transcript: ENSDART00000168398.2 hccsb-201

Description

holocytochrome c synthase b [Source:ZFIN;Acc:ZDB-GENE-000607-78]

Gene Synonyms

hccs, id:ibd1278, wu:fb18h01, wu:fc64e12, wu:fi43e01

Location

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 438 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168398.2	hccsb-201	2058	269aa	ENSDARP00000141384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803H2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176799.2	hccsb-203	2250	269aa	ENSDARP00000144080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803H2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169854.2	hccsb-202	659	47aa	ENSDARP00000135818.1	Nonsense mediated decay	A0A0R4IKC6	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,058 bps, Translation length: 269 residues

Version

ENSDART00000168398.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.