Transcript: ENSDART00000168388.2 BCO1-202

Description

beta-carotene oxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-010508-1]

Location

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 3 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168388.2	BCO1-202	2088	565aa	ENSDARP00000135082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000162471.2	BCO1-201	1790	516aa	ENSDARP00000137596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTS0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169566.2	BCO1-203	824	275aa	ENSDARP00000136395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,088 bps, Translation length: 565 residues

Version

ENSDART00000168388.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.