Transcript: ENSDART00000168287.2 bco1l-201

Description

beta-carotene oxygenase 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1191]

Gene Synonyms

bcmo1b, bcmo1l, zgc:63614

Location

About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 1 variant allele and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168287.2	bco1l-201	2099	535aa	ENSDARP00000132538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169056.2	bco1l-202	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,099 bps, Translation length: 535 residues

Version

ENSDART00000168287.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.