Transcript: ENSDART00000168170.2 TTC39C-201

Description

tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]

Gene Synonyms

si:ch73-264b7.2, si:dkey-121a11.7, zgc:110162

Location

About this transcript

This transcript has 15 exons, is annotated with 6 domains and features, is associated with 460 variant alleles and maps to 191 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168170.2	TTC39C-201	4309	579aa	ENSDARP00000135033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXE6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161878.2	TTC39C-202	1006	275aa	ENSDARP00000140059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 4,309 bps, Translation length: 579 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LXE6

Version

ENSDART00000168170.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

3' standard supported extension [Definitions]