Transcript: ENSDART00000168014.2 MCTP1-202

Description

multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]

Location

Chromosome 10: 43,862,964-43,928,937 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 44 domains and features, is associated with 1449 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060871.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168014.2	MCTP1-202	5399	858aa	ENSDARP00000133953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000086220.5	MCTP1-203	5721	826aa	ENSDARP00000080655.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000135680.3	MCTP1-201	280	93aa	ENSDARP00000122667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 5,399 bps, Translation length: 858 residues

Version

ENSDART00000168014.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000168014.2 MCTP1-202

Summary

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Transcript: ENSDART00000168014.2 MCTP1-202

Summary

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