Transcript: ENSDART00000168011.2 tmprss4a-201

Description

transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]

Gene Synonyms

tmprss4, zgc:152909

Location

About this transcript

This transcript has 13 exons, is annotated with 26 domains and features, is associated with 547 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168011.2	tmprss4a-201	2548	430aa	ENSDARP00000131889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ID97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169894.2	tmprss4a-203	927	309aa	ENSDARP00000133846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJV1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000168997.2	tmprss4a-202	746	154aa	ENSDARP00000130279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IB12	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,548 bps, Translation length: 430 residues

Version

ENSDART00000168011.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.